Add immunology section
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@@ -342,3 +342,75 @@
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doi = {10.1038/nbt1008-1113},
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url = {https://doi.org/10.1038/nbt1008-1113}
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}
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@Article{Shugay2014,
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author = {Shugay, Mikhail and Britanova, Olga V. and Merzlyak,
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Ekaterina M. and Turchaninova, Maria A. and Mamedov, Ilgar Z.
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and Tuganbaev, Timur R. and Bolotin, Dmitriy A. and
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Staroverov, Dmitry B. and Putintseva, Ekaterina V. and
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Plevova, Karla and Linnemann, Carsten and Shagin, Dmitriy and
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Pospisilova, Sarka and Lukyanov, Sergey and Schumacher, Ton N.
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and Chudakov, Dmitriy M.},
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title = {Towards error-free profiling of immune repertoires},
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journal = {Nature Methods},
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year = 2014,
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month = {Jun},
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day = 01,
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volume = 11,
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number = 6,
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pages = {653-655},
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abstract = {A two-step error correction process for high
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throughput--sequenced T- and B-cell receptors allows the
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elimination of most errors while not diminishing the natural
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complexity of the repertoires.},
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issn = {1548-7105},
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doi = {10.1038/nmeth.2960},
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url = {https://doi.org/10.1038/nmeth.2960}
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}
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@Article{Ma2019,
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author = {Ma, Xiaotu and Shao, Ying and Tian, Liqing and Flasch,
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Diane A. and Mulder, Heather L. and Edmonson, Michael N. and
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Liu, Yu and Chen, Xiang and Newman, Scott and Nakitandwe, Joy
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and Li, Yongjin and Li, Benshang and Shen, Shuhong and Wang,
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Zhaoming and Shurtleff, Sheila and Robison, Leslie L. and
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Levy, Shawn and Easton, John and Zhang, Jinghui},
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title = {Analysis of error profiles in deep next-generation
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sequencing data},
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journal = {Genome Biology},
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year = 2019,
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month = {Mar},
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day = 14,
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volume = 20,
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number = 1,
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pages = 50,
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abstract = {Sequencing errors are key confounding factors for detecting
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low-frequency genetic variants that are important for cancer
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molecular diagnosis, treatment, and surveillance using deep
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next-generation sequencing (NGS). However, there is a lack of
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comprehensive understanding of errors introduced at various
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steps of a conventional NGS workflow, such as sample handling,
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library preparation, PCR enrichment, and sequencing. In this
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study, we use current NGS technology to systematically
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investigate these questions.},
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issn = {1474-760X},
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doi = {10.1186/s13059-019-1659-6},
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}
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@mastersthesis{BenítezCantos-Master,
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author = "María Soledad Benítez Cantos",
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title = "Análisis de repertorios de receptores de células T a partir de datos de secuenciación masiva",
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school = "Universidad de Granada",
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year = "2019",
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month = "{Jul}",
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}
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@inbook{abbas_lichtman_pillai_2017,
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place = {Philadelphia, PA},
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edition = {9th},
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booktitle = {Cellular and molecular immunology},
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publisher = {Elsevier},
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author = {Abbas, Abul K. and Lichtman, Andrew H. and Pillai, Shiv},
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year = 2017,
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pages = 204
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}
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