Add basic explanation of DNA
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@@ -414,3 +414,96 @@
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year = 2017,
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pages = 204
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}
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@Article{CRICK1970,
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author = {Crick, Francis},
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title = {Central Dogma of Molecular Biology},
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journal = {Nature},
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year = 1970,
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month = {Aug},
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day = 01,
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volume = 227,
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number = 5258,
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pages = {561-563},
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abstract = {The central dogma of molecular biology deals with the
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detailed residue-by-residue transfer of sequential
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information. It states that such information cannot be
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transferred from protein to either protein or nucleic acid.},
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issn = {1476-4687},
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doi = {10.1038/227561a0},
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url = {https://doi.org/10.1038/227561a0}
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}
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@Article{Salk2018,
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author = {Salk, Jesse J. and Schmitt, Michael W. and Loeb, Lawrence
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A.},
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title = {Enhancing the accuracy of next-generation sequencing for
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detecting rare and subclonal mutations},
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journal = {Nature Reviews Genetics},
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year = 2018,
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month = {May},
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day = 01,
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volume = 19,
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number = 5,
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pages = {269-285},
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abstract = {The ability to identify low-frequency genetic variants
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among heterogeneous populations of cells or DNA molecules is
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important in many fields of basic science, clinical medicine
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and other applications, yet current high-throughput DNA
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sequencing technologies have an error rate between 1 per 100
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and 1 per 1,000 base pairs sequenced, which obscures their
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presence below this level.As next-generation sequencing
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technologies evolved over the decade, throughput has improved
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markedly, but raw accuracy has remained generally unchanged.
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Researchers with a need for high accuracy developed data
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filtering methods and incremental biochemical improvements
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that modestly improve low-frequency variant detection, but
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background errors remain limiting in many fields.The most
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profoundly impactful means for reducing errors, first
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developed approximately 7 years ago, has been the concept of
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single-molecule consensus sequencing. This entails redundant
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sequencing of multiple copies of a given specific DNA molecule
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and discounting of variants that are not present in all or
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most of the copies as likely errors.Consensus sequencing can
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be achieved by labelling each molecule with a unique molecular
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barcode before generating copies, which allows subsequent
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comparison of these copies or schemes whereby copies are
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physically joined and sequenced together. Because of
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trade-offs in cost, time and accuracy, no single method is
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optimal for every application, and each method should be
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considered on a case-by-case basis.Major applications for
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high-accuracy DNA sequencing include non-invasive cancer
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diagnostics, cancer screening, early detection of cancer
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relapse or impending drug resistance, infectious disease
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applications, prenatal diagnostics, forensics and mutagenesis
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assessment.Future advances in ultra-high-accuracy sequencing
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are likely to be driven by an emerging generation of
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single-molecule sequencers, particularly those that allow
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independent sequence comparison of both strands of native DNA
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duplexes.},
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issn = {1471-0064},
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doi = {10.1038/nrg.2017.117},
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url = {https://doi.org/10.1038/nrg.2017.117}
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}
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@book{book:lehninger,
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title = {Lehninger-Principles of Biochemistry},
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author = {Albert Lehninger, David L. Nelson, Michael M. Cox},
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publisher = {W. H. Freeman},
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isbn = {9781429224161,1429224169},
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year = 2008,
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edition = {5th Edition},
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pages = 276
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}
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@inproceedings{crick1958protein,
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title = {On protein synthesis},
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author = {Crick, Francis HC},
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booktitle = {Symp Soc Exp Biol},
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volume = 12,
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number = {138-63},
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pages = 8,
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year = 1958
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}
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