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35406497a3
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35406497a3 | |||
b771071974 |
1
.gitignore
vendored
1
.gitignore
vendored
@ -1,3 +1,2 @@
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*.csv
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*.fasta
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*.fastq
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@ -19,5 +19,6 @@ fastq=".fastq"
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filename="sequence"
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prefix="curesim_"
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Rscript src/repertoire.r "$sequences" && java -jar tools/CuReSim.jar -n $((number_of_reads * sequences)) -m "$read_mean_size" -sd "$read_variance_size" -f "$data_directory$filename$fasta" -o "$data_directory$prefix$filename$fastq"
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Rscript src/repertoire.r "$sequences" &&
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java -jar tools/CuReSim.jar -n $((number_of_reads * sequences)) -m "$read_mean_size" -sd "$read_variance_size" -f "$data_directory$filename$fasta" -o "$data_directory$prefix$filename$fastq"
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rm "$data_directory/log.txt"
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