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8870da8543
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Create a validation set
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2021-06-06 00:04:18 +02:00 |
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38903c5737
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Rename ref_sequence to label
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2021-06-06 00:03:15 +02:00 |
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035162bd8d
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Fix position weight matrix assignment
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2021-06-05 20:40:13 +02:00 |
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02d20d4e72
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Add reference sequence to each dataset instance
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2021-06-05 20:34:59 +02:00 |
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c9de0c8320
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Add learning rate and l2 regularizer constants
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2021-06-03 18:52:26 +02:00 |
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ccaa8484c7
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Document read_dataset and process_input
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2021-06-03 18:51:49 +02:00 |
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f8c1a54be3
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Apply index-based encoding to the DNA sequence
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2021-06-03 18:29:43 +02:00 |
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d34e291085
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Generate a dataset from the TFRecords files
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2021-06-01 23:06:25 +02:00 |
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220c0482f1
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Move hardcorded data to a constants module
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2021-06-01 19:27:10 +02:00 |
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44ff69dc9e
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Document the preprocessing module
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2021-06-01 18:46:17 +02:00 |
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5ac81c049f
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Change BASES constant to a local variable
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2021-06-01 18:34:29 +02:00 |
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16c01afbe7
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Create a dataset and write it to TFRecords files
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2021-06-01 18:26:13 +02:00 |
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59aa61112e
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Create a basic CNN model
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2021-05-31 20:02:44 +02:00 |
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731b76a0af
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Remove redundant modules
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2021-05-31 20:00:43 +02:00 |
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6201e35e99
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Document the data parsing function
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2021-05-11 20:41:54 +02:00 |
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eb072836a1
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Parse a FASTQ file into a Tensor
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2021-05-06 20:34:39 +02:00 |
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